Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907653.1_cds_XP_016457756.1_51449
CDS Infomation

[gene=LOC107781551] [db_xref=GeneID:107781551] [protein=potassium channel SKOR-like] [protein_id=XP_016457756.1] [location=join(3028..3242,3346..3409,3927..4266,4367..4662,4763..4843,5023..5121,5241..5462,5824..6012,6386..6461,6555..6849,6989..7110,7299..7543)] [gbkey=CDS]
Sequence

ATGTGGGAAAATTTTATCCTAATATGGTCAATTTATTCATCATTTTTCACACCTATGGAG
TTTGCCTTCTTCAATGGATTACCAAGGAAACTCTTTCTCTTAGACATCTGTGGTCAGATA
GTTTTTCTTGTGGATATTGTCCTGCAATTCTTTGTTGCATATAGAGATAGTCAGACTTAC
AAGATGGTATACAAACGAACCCCTATTGCTCTTCGGTACTTAAAATCTCATTTTATTCTT
GATTTTCTTAGTTGCATGCCGTGGGATATAATTTACAAGGCTGTTGGCAGCAAAGAAGAA
GTGAGATACCTCTTATGGATTAGGTTGAGCAGGGCGCGCAGAATTACTTACTTTTTCCAA
AAGATGGAGAAAGATATTCGGATCAATTACCTCTTCACTAGAATTGTAAAACTTATCACT
GTTGAACTCTACTGCACACATACAGCTGCCTGCATCTTTTATTATTTGGCGACTACGCTG
TCTGAACAACAAGAAGGTTACACATGGATTGGTAGTTTGAAATTGGGAGACTACAGTTAC
TCAAACTTCAGAGATATTGATCTTTGGACGCGATACACTACTTCAATGTATTTTGCTATT
GTTACTATGGCAACTGTTGGTTATGGAGATATACACGCAGTCAATTTGAGGGAAATGATA
TTTGTCATGATTTATGTCTCCTTTGATATGATTCTTAGTGCTTATTTGATCGGTAACATG
ACAGCTTTAATCGTGAAAGGATCAAAAACTGAGCGATACAGAGATAAGATGACAGATTTA
TTGAAATATATGAACAGAAATAGACTTGGAAGGGATATCCGTAATCAAATAAAAGGTCAC
TTGCGATTACAATATGAAAGTGCTTATACTGATGCAGCTGTTCTCCAGGACATTCCAATC
TCAATCCGCGCCAAGATTTCGCAGAGTTTATATCAGTCTTACATAGAAAATGTTCCTCTT
TTTAAGGGCTGTTCCTCTGAATTCATAAGTCAAGTTGTAACTCGAGTCCACGAAGAATTT
TTCCTCCCCGGAGAAGTAATAATGGAACAAGGGAATGTAGTAGACCAGCTTTATTTTGTC
TGCCATGGCGTTCTGGAGGAGGTCGGTATAGCGAAGGATGGATCAGAAGAAACAGTGGCA
CTTCTTGAACCTAACAGCTCATTTGGAGATATTTCCATTGTTTGTAACATTCCTCAACCA
TATACAGTTCGTGTTTGTGAACTGTGTAGGCTCATACGTATCGATAAGCAGTCATTTTCC
AATATTTTGGAGATTTATTTTCATGATGGAAGAAGAATCTTGAGTAATTTATTACAGGGA
AAAGAATCTAATCTCCGCGTAAAGCAACTGGAGTCAGATATCGCATTCCATATAGGGAAG
CACGAGGCAGAACTTGCTTTGAAAGTGAATAGTGCAGCTTATCATGGTGATTTGCATCAG
CTGAAGAGTTTAATTCACGCTGGAGCTGATCCCAACAAGAAAGATTATGATGGAAGATCA
CCTTTGCATCTTGCAGCATCAAGAGGCTATGAAGATATAACTCTTTTCCTTATCCAAGAA
GGCGTTGATATAAATGCTCCAGATAAATTTGGCAACACACCGTTGCTTGAAGCAATCAAG
AGTGGACATGATCGAGTTGCTTCATTACTTGTTAAGGAAGGGGCCTTGTTGAAAATTGAA
AATGCTGGTAGTTTCCTTTGTATGGTGATAGCAAAGGGCGATTCAGATCTATTGCGAAGG
CTATTGTCCAATGGTGTTGATCCCAACTCCAAAGACTATGATCAACGAACACCACTTCAT
GTAGCTGCTTCTCAGGGGCTATACTCAATGGCCAAAATGCTCTTGGGAGCTGGTGCTTCT
GTTTTCACTAAGGATAGATGGGGAAATACTCCAGTTGATGAAGCTAGAGTAAGTGGAAAC
AAGCAAATGATCGGTCTTCTGGAAGAAGCAAAATCTGCTCAGTTATCTGAATTCCCTGAT
GTTCCACATGAGATCTCAGAAAAATTGCGTCCGAGGAAATGTACTGTGTTTCCTTTCCAC
CCATGGGAGTCCAAAGATGTGAGAAAACATGGTGTTGTAATGTGGATACCTCAGACTATC
GAGGAGCTCGTTACCACAGCATCTGAGAAACTCAATTTTCCATCTGACTCTTGTATATTA
TCAGAAGATGCTGGTAAAATTCTTGATATAGATATGATTGTTGATGGCCAAAAATTGTAC
TTGATCAATGATCAATCAACTTGA

Peptide Sequence

PEP ID

XP_016457756.1
PEP Infomation

PREDICTED: potassium channel SKOR-like [Nicotiana tabacum]
Sequence

MWENFILIWSIYSSFFTPMEFAFFNGLPRKLFLLDICGQIVFLVDIVLQFFVAYRDSQTY
KMVYKRTPIALRYLKSHFILDFLSCMPWDIIYKAVGSKEEVRYLLWIRLSRARRITYFFQ
KMEKDIRINYLFTRIVKLITVELYCTHTAACIFYYLATTLSEQQEGYTWIGSLKLGDYSY
SNFRDIDLWTRYTTSMYFAIVTMATVGYGDIHAVNLREMIFVMIYVSFDMILSAYLIGNM
TALIVKGSKTERYRDKMTDLLKYMNRNRLGRDIRNQIKGHLRLQYESAYTDAAVLQDIPI
SIRAKISQSLYQSYIENVPLFKGCSSEFISQVVTRVHEEFFLPGEVIMEQGNVVDQLYFV
CHGVLEEVGIAKDGSEETVALLEPNSSFGDISIVCNIPQPYTVRVCELCRLIRIDKQSFS
NILEIYFHDGRRILSNLLQGKESNLRVKQLESDIAFHIGKHEAELALKVNSAAYHGDLHQ
LKSLIHAGADPNKKDYDGRSPLHLAASRGYEDITLFLIQEGVDINAPDKFGNTPLLEAIK
SGHDRVASLLVKEGALLKIENAGSFLCMVIAKGDSDLLRRLLSNGVDPNSKDYDQRTPLH
VAASQGLYSMAKMLLGAGASVFTKDRWGNTPVDEARVSGNKQMIGLLEEAKSAQLSEFPD
VPHEISEKLRPRKCTVFPFHPWESKDVRKHGVVMWIPQTIEELVTTASEKLNFPSDSCIL
SEDAGKILDIDMIVDGQKLYLINDQST

Transcript Sequence

Gene sequence data has not been registered.